Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | FD718_20200 | Not Available | - | 4508391 - 4508534 | 5484.96 |
| type b 50s ribosomal protein l31 | FD718_20205 | Not Available | - | 4508534 - 4508794 | 9982.79 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | FD718_20210 | Not Available | + | 4508917 - 4509615 | 25701.5 |
| proline--trna ligase | FD718_20215 | Not Available | + | 4509747 - 4511465 | 63287.5 |
| ggdef domain-containing protein | FD718_20220 | Not Available | + | 4511662 - 4512522 | 33236.4 |
| yaep family protein | FD718_20225 | Not Available | + | 4512663 - 4512866 | 7392.92 |
| duf4250 domain-containing protein | FD718_20230 | Not Available | + | 4512870 - 4513058 | 7291.86 |
| transposase | FD718_20235 | Not Available | - | 4513142 - 4514353 | 42941.3 |
| d-alanine--d-alanine ligase | FD718_20240 | Not Available | - | 4514557 - 4515468 | 33347.1 |
| trna lysidine(34) synthetase tils | FD718_20245 | Not Available | - | 4515620 - 4516996 | 52123.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.