Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | FD718_04765 | Not Available | - | 1019265 - 1019699 | 15507.4 |
| lipoprotein signal peptidase | FD718_04770 | Not Available | - | 1019808 - 1020308 | 18685.9 |
| isoleucine--trna ligase | FD718_04775 | Not Available | - | 1020308 - 1023148 | 105816.0 |
| bifunctional riboflavin kinase/fad synthetase | FD718_04780 | Not Available | - | 1023154 - 1024116 | 35908.6 |
| murein biosynthesis integral membrane protein murj | FD718_04785 | Not Available | - | 1024198 - 1025757 | 56700.3 |
| 30s ribosomal protein s20 | FD718_04790 | Not Available | + | 1025968 - 1026228 | 9677.15 |
| winged helix-turn-helix transcriptional regulator | FD718_04795 | Not Available | - | 1026319 - 1026621 | 11416.0 |
| transcriptional activator nhar | FD718_04800 | Not Available | - | 1026719 - 1027606 | 34110.3 |
| hypothetical protein | FD718_04805 | Not Available | - | 1027707 - 1027952 | 9066.79 |
| na+/h+ antiporter nhaa | FD718_04810 | Not Available | - | 1027957 - 1029129 | 40704.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.