Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | FD718_04715 | Not Available | - | 1006075 - 1006704 | 23237.1 |
| ribosome assembly rna-binding protein yhby | FD718_04720 | Not Available | + | 1006918 - 1007214 | 11097.8 |
| transcription elongation factor grea | FD718_04725 | Not Available | - | 1007347 - 1007820 | 17597.1 |
| porin | FD718_04730 | Not Available | + | 1008461 - 1009477 | 36983.4 |
| serine-type d-ala-d-ala carboxypeptidase | FD718_04735 | Not Available | + | 1009587 - 1010981 | 51505.3 |
| magnesium transporter | FD718_04740 | Not Available | - | 1011080 - 1011931 | 30351.8 |
| carbamoyl-phosphate synthase large subunit | FD718_04745 | Not Available | - | 1012497 - 1015721 | 117839.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | FD718_04750 | Not Available | - | 1015738 - 1016877 | 40879.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | FD718_04755 | Not Available | - | 1017422 - 1018228 | 28429.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | FD718_04760 | Not Available | - | 1018304 - 1019251 | 34866.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.