Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor guanylyltransferase moba | FD718_04615 | Not Available | - | 986157 - 986750 | 21897.2 |
| energy-coupling factor abc transporter atp-binding protein | FD718_04620 | Not Available | - | 986737 - 987441 | 26446.0 |
| abc transporter permease subunit | FD718_04625 | Not Available | - | 987461 - 988162 | 25317.8 |
| tungsten abc transporter substrate-binding protein | FD718_04630 | Not Available | - | 988248 - 989072 | 30111.3 |
| sigma-54-dependent fis family transcriptional regulator | FD718_04635 | Not Available | + | 989366 - 990835 | 54970.7 |
| sensor histidine kinase | FD718_04640 | Not Available | + | 990837 - 992882 | 77492.1 |
| hypothetical protein | FD718_04645 | Not Available | + | 993046 - 993321 | 10370.4 |
| type vi secretion system contractile sheath small subunit | FD718_04650 | Not Available | + | 994021 - 994518 | 18149.6 |
| type vi secretion system contractile sheath large subunit | FD718_04655 | Not Available | + | 994572 - 996050 | 55662.8 |
| type vi secretion system baseplate subunit tsse | FD718_04660 | Not Available | + | 996055 - 996492 | 16293.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.