Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative pyridoxal-dependent aspartate 1-decarboxylase | FD718_04415 | Not Available | - | 939293 - 940942 | 61636.8 |
| duf2860 domain-containing protein | FD718_04420 | Not Available | - | 941085 - 942074 | 36938.6 |
| hypothetical protein | FD718_04425 | Not Available | - | 942270 - 942782 | 19865.4 |
| mets family nss transporter small subunit | FD718_04430 | Not Available | - | 942962 - 943066 | 3695.65 |
| sodium-dependent transporter | FD718_04435 | Not Available | - | 943068 - 944549 | 53660.7 |
| hypothetical protein | FD718_04440 | Not Available | + | 945615 - 947018 | 54045.4 |
| duf4433 domain-containing protein | FD718_04445 | Not Available | + | 947009 - 947650 | 24601.8 |
| hypothetical protein | FD718_04450 | Not Available | + | 947651 - 949282 | 60609.8 |
| patatin family protein | FD718_04455 | Not Available | + | 949720 - 950943 | 46429.8 |
| manganese-dependent inorganic pyrophosphatase | FD718_04460 | Not Available | - | 951029 - 951934 | 33038.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.