Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recx family transcriptional regulator | FD718_04365 | Not Available | - | 926051 - 926839 | 30174.0 |
| hypothetical protein | FD718_04370 | Not Available | - | 926960 - 928681 | 65088.4 |
| hyad/hybd family hydrogenase maturation endopeptidase | FD718_04375 | Not Available | - | 928678 - 929223 | 20226.4 |
| ni/fe-hydrogenase, b-type cytochrome subunit | FD718_04380 | Not Available | - | 929226 - 929930 | 27046.3 |
| nickel-dependent hydrogenase large subunit | FD718_04385 | Not Available | - | 929943 - 931646 | 62493.1 |
| hydrogenase small subunit | FD718_04390 | Not Available | - | 931650 - 932786 | 40916.0 |
| molecular chaperone tord | FD718_04395 | Not Available | - | 933142 - 933789 | 24366.1 |
| trimethylamine-n-oxide reductase tora | FD718_04400 | Not Available | - | 933993 - 936524 | 93375.1 |
| pentaheme c-type cytochrome torc | FD718_04405 | Not Available | - | 936599 - 937765 | 43264.7 |
| two-component system response regulator torr | FD718_04410 | Not Available | + | 937967 - 938680 | 27276.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.