Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv-a pilus assembly atpase pilb | FD718_04165 | Not Available | - | 889709 - 891400 | 62514.9 |
| pilin | FD718_04170 | Not Available | - | 891400 - 891801 | 13687.7 |
| hypothetical protein | FD718_04175 | Not Available | - | 892211 - 892921 | 27854.2 |
| hypothetical protein | FD718_04180 | Not Available | - | 893014 - 893550 | 20229.1 |
| hypothetical protein | FD718_04185 | Not Available | + | 893793 - 894149 | 12894.7 |
| sgnh/gdsl hydrolase family protein | FD718_04190 | Not Available | - | 894244 - 895461 | 45987.5 |
| hypothetical protein | FD718_04195 | Not Available | + | 895971 - 896639 | 23580.3 |
| qnr family pentapeptide repeat protein | FD718_04200 | Not Available | + | 896774 - 897412 | 24359.2 |
| lactoylglutathione lyase | FD718_04205 | Not Available | - | 897469 - 897909 | 16563.7 |
| arginine abc transporter permease artm | FD718_04210 | Not Available | - | 897973 - 898644 | 24565.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.