Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan glycosyltransferase ftsi | FD718_04065 | Not Available | + | 865678 - 867408 | 63055.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | FD718_04070 | Not Available | + | 867433 - 868950 | 54003.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | FD718_04075 | Not Available | + | 868947 - 870329 | 48997.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | FD718_04080 | Not Available | + | 870326 - 871408 | 40260.5 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | FD718_04085 | Not Available | + | 871412 - 872755 | 47656.0 |
| cell division protein ftsw | FD718_04090 | Not Available | + | 872749 - 874053 | 47915.5 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | FD718_04095 | Not Available | + | 874040 - 875104 | 37847.9 |
| udp-n-acetylmuramate--l-alanine ligase | FD718_04100 | Not Available | + | 875120 - 876580 | 52730.2 |
| ftsq-type potra domain-containing protein | FD718_04105 | Not Available | + | 876853 - 877644 | 30034.5 |
| cell division protein ftsa | FD718_04110 | Not Available | + | 877644 - 878903 | 45286.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.