Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | FD718_03960 | Not Available | + | 846901 - 848157 | 44205.5 |
| outer membrane-stress sensor serine endopeptidase degs | FD718_03965 | Not Available | - | 848265 - 849380 | 39662.0 |
| do family serine endopeptidase | FD718_03970 | Not Available | - | 849528 - 850898 | 48212.5 |
| duf1043 family protein | FD718_03975 | Not Available | - | 851009 - 851470 | 17122.1 |
| afg1 family atpase | FD718_03980 | Not Available | + | 851626 - 852729 | 42968.7 |
| 50s ribosomal protein l13 | FD718_03985 | Not Available | + | 852998 - 853426 | 15853.5 |
| 30s ribosomal protein s9 | FD718_03990 | Not Available | + | 853442 - 853834 | 14798.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | FD718_03995 | Not Available | + | 854249 - 854842 | 21110.2 |
| cytochrome bc complex cytochrome b subunit | FD718_04000 | Not Available | + | 854842 - 856107 | 48152.6 |
| cytochrome c1 | FD718_04005 | Not Available | + | 856104 - 856841 | 27923.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.