Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | FD718_03660 | Not Available | + | 776918 - 777862 | 35722.6 |
| oxidoreductase | FD718_03665 | Not Available | - | 777946 - 778926 | 34881.4 |
| acetyl-coa c-acyltransferase fada | FD718_03670 | Not Available | - | 779128 - 780291 | 41224.1 |
| fatty acid oxidation complex subunit alpha fadb | FD718_03675 | Not Available | - | 780302 - 782482 | 79466.8 |
| yigz family protein | FD718_03680 | Not Available | + | 782691 - 783308 | 22303.5 |
| potassium transporter | FD718_03685 | Not Available | + | 783346 - 784803 | 53227.1 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | FD718_03690 | Not Available | + | 784813 - 785346 | 20618.9 |
| homoserine o-succinyltransferase | FD718_03695 | Not Available | + | 785911 - 786852 | 36321.1 |
| sodium:proton antiporter | FD718_03700 | Not Available | - | 786985 - 788265 | 46540.9 |
| methionine synthase | FD718_03705 | Not Available | + | 788462 - 792127 | 135246.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.