Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | FD718_03560 | Not Available | - | 755689 - 757311 | 60689.5 |
| membrane protein insertion efficiency factor yidd | FD718_03565 | Not Available | - | 757314 - 757571 | 9435.64 |
| ribonuclease p protein component | FD718_03570 | Not Available | - | 757538 - 757894 | 13681.7 |
| 50s ribosomal protein l34 | FD718_03575 | Not Available | - | 757907 - 758044 | 5253.62 |
| amino acid abc transporter atp-binding protein | FD718_03580 | Not Available | - | 758229 - 758963 | 27262.2 |
| amino acid abc transporter permease | FD718_03585 | Not Available | - | 758960 - 759631 | 24925.4 |
| amino acid abc transporter substrate-binding protein | FD718_03590 | Not Available | - | 759667 - 760422 | 28168.6 |
| chromosomal replication initiator protein dnaa | FD718_03595 | Not Available | + | 760863 - 762287 | 53293.0 |
| dna polymerase iii subunit beta | FD718_03600 | Not Available | + | 762289 - 763386 | 40503.6 |
| dna replication/repair protein recf | FD718_03605 | Not Available | + | 763390 - 764472 | 40690.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.