Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1040 family protein | FD718_03410 | Not Available | + | 724014 - 724280 | 10248.5 |
| cytochrome c oxidase accessory protein ccog | FD718_03415 | Not Available | + | 724469 - 725806 | 51366.7 |
| serine/threonine protein kinase | FD718_03420 | Not Available | + | 725849 - 726838 | 38612.6 |
| thiol:disulfide interchange protein dsba/dsbl | FD718_03425 | Not Available | + | 726925 - 727527 | 22436.1 |
| atp-dependent protease | FD718_03430 | Not Available | - | 727631 - 729163 | 55167.8 |
| acetolactate synthase 2 catalytic subunit | FD718_03435 | Not Available | + | 729703 - 731349 | 59330.5 |
| acetolactate synthase 2 small subunit | FD718_03440 | Not Available | + | 731352 - 731609 | 9743.02 |
| branched-chain amino acid transaminase | FD718_03445 | Not Available | + | 731649 - 732578 | 33966.4 |
| dihydroxy-acid dehydratase | FD718_03450 | Not Available | + | 732688 - 734529 | 65808.4 |
| threonine ammonia-lyase, biosynthetic | FD718_03455 | Not Available | + | 734531 - 736090 | 57092.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.