Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-protecting protein dpra | FD718_03360 | Not Available | - | 711522 - 712616 | 39167.5 |
| lysm peptidoglycan-binding domain-containing protein | FD718_03365 | Not Available | - | 712619 - 713677 | 39951.2 |
| peptide deformylase | FD718_03370 | Not Available | + | 713966 - 714478 | 19091.8 |
| methionyl-trna formyltransferase | FD718_03375 | Not Available | + | 714491 - 715435 | 34323.3 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | FD718_03380 | Not Available | + | 715574 - 716851 | 47421.9 |
| trk system potassium transporter trka | FD718_03385 | Not Available | + | 717040 - 718416 | 50219.6 |
| trkh family potassium uptake protein | FD718_03390 | Not Available | + | 718423 - 719868 | 51861.4 |
| phosphatidylserine decarboxylase family protein | FD718_03395 | Not Available | + | 720384 - 721736 | 50152.1 |
| hemolysin iii family protein | FD718_03400 | Not Available | - | 721785 - 722444 | 24051.7 |
| fadr family transcriptional regulator | FD718_03405 | Not Available | - | 722610 - 723284 | 25693.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.