Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_03310 | Not Available | - | 704533 - 704964 | 17124.8 |
| gamma carbonic anhydrase family protein | FD718_03315 | Not Available | + | 705386 - 705937 | 20310.5 |
| duf1488 domain-containing protein | FD718_03320 | Not Available | - | 705927 - 706193 | 10121.0 |
| shikimate dehydrogenase | FD718_03325 | Not Available | - | 706200 - 707027 | 29483.2 |
| oxygen-dependent coproporphyrinogen oxidase | FD718_03330 | Not Available | - | 707036 - 707947 | 35273.5 |
| threonylcarbamoyl-amp synthase | FD718_03335 | Not Available | - | 707951 - 708508 | 20239.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | FD718_03340 | Not Available | + | 708701 - 709186 | 16907.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | FD718_03345 | Not Available | + | 709189 - 710310 | 40682.8 |
| dna topoisomerase | FD718_03350 | Not Available | - | 710378 - 710935 | 20900.1 |
| duf494 domain-containing protein | FD718_03355 | Not Available | - | 711046 - 711519 | 18449.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.