Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase i fole | FD718_03260 | Not Available | + | 695110 - 695763 | 24454.7 |
| lysr family transcriptional regulator | FD718_03265 | Not Available | + | 695870 - 696790 | 34999.3 |
| yjjw family glycine radical enzyme activase | FD718_03270 | Not Available | - | 696806 - 697690 | 33370.4 |
| yjji family glycine radical enzyme | FD718_03275 | Not Available | - | 697713 - 699257 | 57628.9 |
| duf333 domain-containing protein | FD718_03280 | Not Available | + | 699402 - 699638 | 8255.04 |
| amidase | FD718_03285 | Not Available | + | 700014 - 701780 | 66438.5 |
| helix-turn-helix domain-containing protein | FD718_03290 | Not Available | + | 701823 - 701915 | 3540.4 |
| hypothetical protein | FD718_03295 | Not Available | + | 702003 - 702836 | 32428.1 |
| dini family protein | FD718_03300 | Not Available | + | 703638 - 703883 | 9289.11 |
| hypothetical protein | FD718_03305 | Not Available | + | 704168 - 704422 | 9861.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.