Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | FD718_03005 | Not Available | - | 632081 - 634741 | 99331.0 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | FD718_03010 | Not Available | - | 634822 - 635595 | 29662.5 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | FD718_03015 | Not Available | - | 635955 - 636533 | 21536.3 |
| hypothetical protein | FD718_03020 | Not Available | - | 637242 - 637595 | 13529.5 |
| helix-turn-helix transcriptional regulator | FD718_03025 | Not Available | + | 637696 - 638013 | 12005.8 |
| hypothetical protein | FD718_03030 | Not Available | + | 638194 - 639150 | 35976.3 |
| hypothetical protein | FD718_03035 | Not Available | + | 639189 - 639893 | 27193.0 |
| sdr family oxidoreductase | FD718_03040 | Not Available | + | 639856 - 640602 | 27875.7 |
| hypothetical protein | FD718_03050 | Not Available | - | 641073 - 641792 | 26826.2 |
| fimbrial chaperone protein | FD718_03055 | Not Available | - | 641863 - 642552 | 25978.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.