Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | FD718_02200 | Not Available | + | 432569 - 435326 | 98284.0 |
| duf496 family protein | FD718_02205 | Not Available | + | 435591 - 435911 | 12797.4 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | FD718_02210 | Not Available | - | 436143 - 437573 | 53724.2 |
| hypothetical protein | FD718_02215 | Not Available | + | 437840 - 443371 | 198931.0 |
| hypothetical protein | FD718_02220 | Not Available | + | 443657 - 444976 | 47124.6 |
| type vi secretion system tip protein vgrg | FD718_02225 | Not Available | + | 445194 - 447227 | 75166.1 |
| duf4123 domain-containing protein | FD718_02230 | Not Available | + | 447206 - 447835 | 24049.7 |
| lysm peptidoglycan-binding domain-containing protein | FD718_02235 | Not Available | + | 447832 - 450336 | 93158.9 |
| formylglycine-generating enzyme family protein | FD718_02240 | Not Available | - | 450377 - 451402 | 38779.2 |
| hypothetical protein | FD718_02245 | Not Available | - | 451720 - 452040 | 12222.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.