Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein | FD718_02150 | Not Available | - | 422434 - 423687 | 45983.0 |
| hamp domain-containing protein | FD718_02155 | Not Available | - | 423699 - 425144 | 54857.0 |
| pts glucose transporter subunit iib | FD718_02160 | Not Available | + | 425393 - 425707 | 11627.5 |
| response regulator transcription factor | FD718_02165 | Not Available | - | 425768 - 426493 | 27185.7 |
| duf3157 family protein | FD718_02170 | Not Available | - | 426610 - 427194 | 21336.9 |
| diguanylate cyclase | FD718_02175 | Not Available | + | 427450 - 428586 | 43702.7 |
| cold-shock protein | FD718_02180 | Not Available | - | 428715 - 428924 | 7466.72 |
| sdr family nad(p)-dependent oxidoreductase | FD718_02185 | Not Available | - | 429578 - 430213 | 23276.8 |
| bifunctional metallophosphatase/5'-nucleotidase | FD718_02190 | Not Available | - | 430350 - 432341 | 72432.2 |
| Trna-ser | Not Available | Not Available | + | 432485 - 432575 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.