Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | FD718_20855 | Not Available | - | 4652628 - 4653395 | 28596.2 |
| hypothetical protein | FD718_20860 | Not Available | + | 4653782 - 4654993 | 44107.6 |
| helix-turn-helix transcriptional regulator | FD718_20865 | Not Available | + | 4655513 - 4656196 | 25916.2 |
| pyridoxamine 5'-phosphate oxidase | FD718_20870 | Not Available | - | 4656218 - 4656856 | 24518.9 |
| ggdef domain-containing protein | FD718_20875 | Not Available | + | 4657097 - 4659022 | 72958.6 |
| phosphatase | FD718_20880 | Not Available | - | 4659974 - 4660720 | 27236.0 |
| trna(met) cytidine acetyltransferase | FD718_20885 | Not Available | - | 4660704 - 4662821 | 79435.0 |
| parb/repb/spo0j family partition protein | FD718_20890 | Not Available | - | 4662942 - 4663916 | 36241.0 |
| para family protein | FD718_20895 | Not Available | - | 4663920 - 4665134 | 45956.2 |
| duf3346 domain-containing protein | FD718_20900 | Not Available | + | 4666334 - 4668334 | 75954.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.