Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 92 protein | FD718_20750 | Not Available | - | 4619819 - 4622332 | 94382.8 |
| uracil-dna glycosylase family protein | FD718_20755 | Not Available | + | 4622716 - 4623303 | 22380.4 |
| nad-dependent epimerase/dehydratase family protein | FD718_20760 | Not Available | - | 4623367 - 4624311 | 35417.0 |
| llm class flavin-dependent oxidoreductase | FD718_20765 | Not Available | + | 4624567 - 4625598 | 39020.3 |
| pts fructose transporter subunit iib | FD718_20770 | Not Available | + | 4625897 - 4626214 | 11693.2 |
| phosphoenolpyruvate--protein phosphotransferase | FD718_20775 | Not Available | + | 4626238 - 4628739 | 92208.8 |
| hypothetical protein | FD718_20780 | Not Available | - | 4629159 - 4629923 | 28637.7 |
| sulfur reduction protein dsre | FD718_20790 | Not Available | + | 4631023 - 4631352 | 12067.6 |
| c-type cytochrome | FD718_20795 | Not Available | - | 4631413 - 4632810 | 51738.2 |
| terc family protein | FD718_20800 | Not Available | - | 4633182 - 4633946 | 28072.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.