Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | FD718_20300 | Not Available | - | 4530278 - 4531474 | 42927.1 |
| cdp-diglyceride synthetase | FD718_20305 | Not Available | - | 4531536 - 4532384 | 30531.4 |
| isoprenyl transferase | FD718_20310 | Not Available | - | 4532490 - 4533254 | 28545.3 |
| ribosome recycling factor | FD718_20315 | Not Available | - | 4533335 - 4533892 | 20767.1 |
| ump kinase | FD718_20320 | Not Available | - | 4533952 - 4534680 | 26086.7 |
| elongation factor ts | FD718_20325 | Not Available | - | 4534773 - 4535618 | 29857.0 |
| 30s ribosomal protein s2 | FD718_20330 | Not Available | - | 4535732 - 4536457 | 26647.1 |
| type i methionyl aminopeptidase | FD718_20335 | Not Available | + | 4536782 - 4537609 | 30549.6 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | FD718_20340 | Not Available | + | 4537689 - 4540310 | 100994.0 |
| flavodoxin | FD718_20345 | Not Available | - | 4540438 - 4540899 | 16921.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.