Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyl transferase subunit alpha | FD718_20250 | Not Available | - | 4517088 - 4518047 | 35220.5 |
| dna polymerase iii subunit alpha | FD718_20255 | Not Available | - | 4518113 - 4521592 | 129993.0 |
| ribonuclease hii | FD718_20260 | Not Available | - | 4521710 - 4522315 | 22050.7 |
| lipid-a-disaccharide synthase | FD718_20265 | Not Available | - | 4522321 - 4523463 | 42635.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | FD718_20270 | Not Available | - | 4523463 - 4524251 | 28438.0 |
| 3-hydroxyacyl-acp dehydratase fabz | FD718_20275 | Not Available | - | 4524248 - 4524703 | 17018.7 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | FD718_20280 | Not Available | - | 4524803 - 4525831 | 36195.5 |
| molecular chaperone | FD718_20285 | Not Available | - | 4525936 - 4526445 | 18896.9 |
| outer membrane protein assembly factor bama | FD718_20290 | Not Available | - | 4526466 - 4528889 | 90141.7 |
| sigma e protease regulator rsep | FD718_20295 | Not Available | - | 4528926 - 4530281 | 49244.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.