Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_20040 | Not Available | - | 4474498 - 4475421 | 35944.4 |
| hypothetical protein | FD718_20050 | Not Available | - | 4476077 - 4476658 | 22505.5 |
| type i restriction endonuclease subunit r | FD718_20055 | Not Available | - | 4476666 - 4479926 | 124391.0 |
| restriction endonuclease subunit s | FD718_20060 | Not Available | - | 4479923 - 4481314 | 51449.9 |
| sam-dependent dna methyltransferase | FD718_20065 | Not Available | - | 4481314 - 4483728 | 90042.9 |
| Tmrna,resume consensus sequence (at 85): aatagtcgcaaacgacga | Not Available | Not Available | + | 4484144 - 4484513 | Not Available |
| ssra-binding protein smpb | FD718_20080 | Not Available | - | 4484636 - 4485118 | 18048.9 |
| ubiquinone-binding protein | FD718_20085 | Not Available | + | 4485312 - 4485746 | 15870.2 |
| rnfh family protein | FD718_20090 | Not Available | + | 4485736 - 4486032 | 11345.7 |
| outer membrane protein assembly factor bame | FD718_20095 | Not Available | - | 4486138 - 4486494 | 13467.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.