Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trp operon repressor | FD718_19985 | Not Available | + | 4462531 - 4462848 | 11862.1 |
| non-canonical purine ntp phosphatase | FD718_19990 | Not Available | - | 4462974 - 4463489 | 18635.4 |
| hypothetical protein | FD718_19995 | Not Available | + | 4463972 - 4464358 | 13539.1 |
| twin-arginine translocation pathway signal | FD718_20000 | Not Available | + | 4464431 - 4466092 | 63596.2 |
| helix-turn-helix domain-containing protein | FD718_20005 | Not Available | - | 4466182 - 4466820 | 23396.6 |
| sporulation protein | FD718_20010 | Not Available | + | 4467446 - 4468174 | 26937.9 |
| dead/deah box helicase | FD718_20015 | Not Available | - | 4468228 - 4470642 | 92581.2 |
| class i sam-dependent methyltransferase | FD718_20020 | Not Available | - | 4470635 - 4471219 | 21805.5 |
| dna helicase ii | FD718_20025 | Not Available | + | 4471400 - 4473268 | 71339.7 |
| type ii toxin-antitoxin system antitoxin hipb | FD718_20035 | Not Available | - | 4473775 - 4474023 | 9352.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.