Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | FD718_19835 | Not Available | + | 4423641 - 4426445 | 102266.0 |
| 30s ribosome-binding factor rbfa | FD718_19840 | Not Available | + | 4426547 - 4426948 | 15348.4 |
| trna pseudouridine(55) synthase trub | FD718_19845 | Not Available | + | 4426951 - 4427898 | 35005.4 |
| 30s ribosomal protein s15 | FD718_19850 | Not Available | + | 4428024 - 4428293 | 10240.4 |
| polyribonucleotide nucleotidyltransferase | FD718_19855 | Not Available | + | 4428638 - 4430764 | 77283.4 |
| lipoprotein nlpi | FD718_19860 | Not Available | + | 4430842 - 4431795 | 35969.7 |
| u32 family peptidase | FD718_19865 | Not Available | - | 4431910 - 4432788 | 32927.2 |
| u32 family peptidase | FD718_19870 | Not Available | - | 4432802 - 4433809 | 37326.1 |
| eal domain-containing protein | FD718_19875 | Not Available | - | 4433972 - 4435996 | 76735.7 |
| scp2 domain-containing protein | FD718_19880 | Not Available | + | 4436191 - 4436712 | 19903.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.