Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhjd | FD718_19625 | Not Available | - | 4369557 - 4370600 | 37960.8 |
| asma family protein | FD718_19630 | Not Available | - | 4370765 - 4372885 | 76257.8 |
| dctp deaminase | FD718_19635 | Not Available | - | 4373108 - 4373701 | 21771.9 |
| uridine kinase | FD718_19640 | Not Available | - | 4373824 - 4374468 | 24303.6 |
| iron-sulfur cluster carrier protein apbc | FD718_19645 | Not Available | - | 4374614 - 4375684 | 38313.2 |
| methionine--trna ligase | FD718_19650 | Not Available | + | 4375946 - 4377994 | 76934.5 |
| l-cystine transporter | FD718_19655 | Not Available | + | 4378349 - 4379749 | 48976.6 |
| coa-disulfide reductase | FD718_19660 | Not Available | + | 4379814 - 4381142 | 48000.8 |
| dicarboxylate/amino acid:cation symporter | FD718_19665 | Not Available | + | 4381655 - 4382971 | 46176.7 |
| hypothetical protein | FD718_19670 | Not Available | + | 4383114 - 4384478 | 52737.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.