Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside phosphorylase | FD718_01785 | Not Available | - | 348346 - 349083 | 27107.5 |
| nicotinamide riboside transporter pnuc | FD718_01790 | Not Available | - | 349080 - 349811 | 27225.5 |
| gntr family transcriptional regulator | FD718_01795 | Not Available | - | 350008 - 350661 | 24856.4 |
| carbohydrate kinase | FD718_01800 | Not Available | + | 350815 - 351144 | 11970.7 |
| altronate hydrolase | FD718_01805 | Not Available | + | 351144 - 352319 | 41692.5 |
| dmt family transporter | FD718_01810 | Not Available | + | 352370 - 353326 | 33707.1 |
| mandelate racemase/muconate lactonizing enzyme family protein | FD718_01815 | Not Available | + | 353424 - 354566 | 42140.5 |
| hyaluronate lyase | FD718_01820 | Not Available | + | 354749 - 357169 | 90996.8 |
| hypothetical protein | FD718_01825 | Not Available | - | 357209 - 357763 | 19976.0 |
| chondroitinase | FD718_01830 | Not Available | - | 357898 - 360978 | 114510.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.