Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilp | FD718_19115 | Not Available | + | 4262874 - 4263389 | 19251.5 |
| type iv pilus secretin pilq family protein | FD718_19120 | Not Available | + | 4263389 - 4265140 | 63714.2 |
| shikimate kinase arok | FD718_19125 | Not Available | + | 4265470 - 4265988 | 19512.1 |
| 3-dehydroquinate synthase | FD718_19130 | Not Available | + | 4266018 - 4267097 | 38789.8 |
| hypothetical protein | FD718_19135 | Not Available | + | 4267112 - 4268623 | 55777.1 |
| adenine-specific dna-methyltransferase | FD718_19140 | Not Available | + | 4268731 - 4269573 | 32213.2 |
| duf2970 domain-containing protein | FD718_19145 | Not Available | - | 4269557 - 4269820 | 9859.83 |
| ribulose-phosphate 3-epimerase | FD718_19150 | Not Available | + | 4269902 - 4270576 | 24736.0 |
| phosphoglycolate phosphatase | FD718_19155 | Not Available | + | 4270576 - 4271265 | 25134.2 |
| tryptophan--trna ligase | FD718_19160 | Not Available | + | 4271363 - 4272385 | 37653.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.