Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts mannose/fructose/sorbose transporter family subunit iid | FD718_01735 | Not Available | + | 340166 - 341059 | 32112.9 |
| pts sugar transporter subunit iia | FD718_01740 | Not Available | + | 341120 - 341563 | 15653.0 |
| n-acetylglucosamine-6-phosphate deacetylase | FD718_01745 | Not Available | + | 341565 - 342719 | 41520.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | FD718_01750 | Not Available | + | 342752 - 343582 | 31052.0 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | FD718_01755 | Not Available | + | 343683 - 344441 | 26870.1 |
| glycoside hydrolase family 105 protein | FD718_01760 | Not Available | + | 344459 - 345502 | 39475.6 |
| endoxylanase | FD718_01765 | Not Available | + | 345571 - 346290 | 27182.4 |
| hypothetical protein | FD718_01770 | Not Available | - | 346344 - 347021 | 24855.3 |
| hypothetical protein | FD718_01775 | Not Available | - | 347097 - 347468 | 13839.3 |
| crp/fnr family transcriptional regulator | FD718_01780 | Not Available | - | 347533 - 348219 | 26498.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.