Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | FD718_19065 | Not Available | + | 4250365 - 4251147 | 26857.0 |
| argininosuccinate synthase | FD718_19070 | Not Available | + | 4251225 - 4252436 | 44320.4 |
| argininosuccinate lyase | FD718_19075 | Not Available | + | 4252539 - 4254416 | 69503.7 |
| dihydrolipoyl dehydrogenase | FD718_19080 | Not Available | - | 4254510 - 4255961 | 52569.1 |
| glutathione peroxidase | FD718_19085 | Not Available | - | 4256043 - 4256771 | 26575.6 |
| dna-binding transcriptional regulator oxyr | FD718_19090 | Not Available | + | 4256931 - 4257830 | 33268.7 |
| pbp1a family penicillin-binding protein | FD718_19095 | Not Available | - | 4257918 - 4260350 | 89050.7 |
| type iv pilus assembly protein pilm | FD718_19100 | Not Available | + | 4260642 - 4261640 | 37109.8 |
| pilus assembly protein pils | FD718_19105 | Not Available | + | 4261637 - 4262278 | 24194.3 |
| fimbrial protein | FD718_19110 | Not Available | + | 4262275 - 4262865 | 22686.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.