Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein-export chaperone secb | FD718_18915 | Not Available | + | 4217614 - 4218081 | 17163.2 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | FD718_18920 | Not Available | + | 4218105 - 4219121 | 35971.2 |
| serine o-acetyltransferase | FD718_18925 | Not Available | + | 4219253 - 4220074 | 29282.3 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | FD718_18930 | Not Available | - | 4220132 - 4220596 | 17438.9 |
| envelope stress sensor histidine kinase cpxa | FD718_18935 | Not Available | - | 4220690 - 4222051 | 51834.5 |
| response regulator | FD718_18940 | Not Available | - | 4222051 - 4222740 | 26065.7 |
| cpxp family protein | FD718_18945 | Not Available | + | 4222931 - 4223416 | 18517.4 |
| 6-phosphofructokinase | FD718_18950 | Not Available | + | 4224013 - 4224975 | 34690.0 |
| triose-phosphate isomerase | FD718_18955 | Not Available | - | 4225090 - 4225860 | 26979.1 |
| duf3135 domain-containing protein | FD718_18960 | Not Available | - | 4226107 - 4226436 | 12459.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.