Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| capsular biosynthesis protein | FD718_18865 | Not Available | - | 4207091 - 4208683 | 60859.3 |
| capsular biosynthesis protein | FD718_18870 | Not Available | - | 4208674 - 4209054 | 14236.1 |
| glycosyltransferase family 4 protein | FD718_18875 | Not Available | - | 4209072 - 4210154 | 40157.1 |
| glycosyltransferase family 25 protein | FD718_18880 | Not Available | - | 4210157 - 4210906 | 29119.1 |
| o-antigen ligase family protein | FD718_18885 | Not Available | - | 4210903 - 4212099 | 45298.5 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | FD718_18890 | Not Available | - | 4212099 - 4213049 | 36414.0 |
| tetr/acrr family transcriptional regulator | FD718_18895 | Not Available | + | 4213221 - 4213862 | 25050.9 |
| peptidase m23 | FD718_18900 | Not Available | - | 4213926 - 4215113 | 43699.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | FD718_18905 | Not Available | - | 4215131 - 4216672 | 55741.1 |
| rhodanese-like domain-containing protein | FD718_18910 | Not Available | + | 4217081 - 4217521 | 16121.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.