Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | FD718_18815 | Not Available | + | 4197764 - 4198573 | 29575.9 |
| nad-dependent epimerase | FD718_18820 | Not Available | + | 4198709 - 4199713 | 37456.4 |
| pantetheine-phosphate adenylyltransferase | FD718_18825 | Not Available | - | 4199776 - 4200258 | 17834.5 |
| glycosyltransferase family 9 protein | FD718_18830 | Not Available | - | 4200278 - 4201309 | 38105.0 |
| 3-deoxy-d-manno-octulosonic acid kinase | FD718_18835 | Not Available | + | 4201401 - 4202105 | 27130.6 |
| 3-deoxy-d-manno-octulosonic acid transferase | FD718_18840 | Not Available | - | 4202102 - 4203373 | 47069.5 |
| cdp-glycerol--glycerophosphate glycerophosphotransferase | FD718_18845 | Not Available | + | 4203537 - 4204592 | 40453.3 |
| glycosyltransferase family 2 protein | FD718_18850 | Not Available | + | 4204592 - 4205362 | 29103.9 |
| lps biosynthesis protein wave | FD718_18855 | Not Available | - | 4205404 - 4206396 | 38179.8 |
| capsular biosynthesis protein | FD718_18860 | Not Available | - | 4206366 - 4207094 | 28013.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.