Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greb | FD718_18715 | Not Available | - | 4178876 - 4179352 | 18679.3 |
| thiol peroxidase | FD718_18720 | Not Available | - | 4179470 - 4179967 | 17531.1 |
| two-component system response regulator ompr | FD718_18725 | Not Available | + | 4180331 - 4181050 | 27359.3 |
| two-component system sensor histidine kinase envz | FD718_18730 | Not Available | + | 4181053 - 4182405 | 49973.5 |
| uracil-xanthine permease | FD718_18735 | Not Available | - | 4182528 - 4183934 | 49234.3 |
| atp-dependent dna helicase recg | FD718_18740 | Not Available | - | 4184239 - 4186320 | 77318.6 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | FD718_18745 | Not Available | - | 4186336 - 4187046 | 26243.5 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | FD718_18750 | Not Available | - | 4187145 - 4189250 | 79109.7 |
| dna-directed rna polymerase subunit omega | FD718_18755 | Not Available | - | 4189269 - 4189544 | 10104.0 |
| guanylate kinase | FD718_18760 | Not Available | - | 4189597 - 4190223 | 23401.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.