Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase | FD718_18665 | Not Available | + | 4168853 - 4169443 | 21996.3 |
| heme a synthase | FD718_18670 | Not Available | + | 4169453 - 4170502 | 38713.1 |
| protoheme ix farnesyltransferase | FD718_18675 | Not Available | + | 4170495 - 4171400 | 33260.7 |
| mate family efflux transporter dinf | FD718_18680 | Not Available | + | 4171521 - 4172858 | 48987.0 |
| hypothetical protein | FD718_18685 | Not Available | + | 4172975 - 4173358 | 14226.8 |
| fe-s biogenesis protein nfua | FD718_18690 | Not Available | - | 4173444 - 4174028 | 21031.9 |
| comf family protein | FD718_18695 | Not Available | - | 4174109 - 4174858 | 28652.0 |
| pimeloyl-acp methyl ester esterase bioh | FD718_18700 | Not Available | + | 4174892 - 4175662 | 27994.0 |
| atp-dependent lon protease | FD718_18705 | Not Available | + | 4175775 - 4176227 | 16771.9 |
| rna-binding transcriptional accessory protein | FD718_18710 | Not Available | - | 4176376 - 4178706 | 85617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.