Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate octaprenyltransferase | FD718_18615 | Not Available | + | 4158016 - 4158879 | 32087.3 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | FD718_18620 | Not Available | - | 4158972 - 4161422 | 92441.1 |
| repressor lexa | FD718_18625 | Not Available | + | 4161791 - 4162417 | 22879.6 |
| class i sam-dependent methyltransferase | FD718_18630 | Not Available | + | 4162568 - 4163365 | 30491.9 |
| cytochrome c oxidase subunit ii | FD718_18635 | Not Available | + | 4163607 - 4164752 | 43011.3 |
| cytochrome c oxidase subunit i | FD718_18640 | Not Available | + | 4164763 - 4166379 | 59832.3 |
| cytochrome c oxidase assembly protein | FD718_18645 | Not Available | + | 4166389 - 4166985 | 21601.9 |
| cytochrome c oxidase subunit 3 | FD718_18650 | Not Available | + | 4166995 - 4167870 | 32626.5 |
| duf2909 domain-containing protein | FD718_18655 | Not Available | - | 4167874 - 4168080 | 7642.97 |
| surf1 family protein | FD718_18660 | Not Available | + | 4168147 - 4168869 | 28372.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.