Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coniferyl aldehyde dehydrogenase | FD718_18465 | Not Available | - | 4130725 - 4132185 | 54436.1 |
| dtw domain-containing protein | FD718_18470 | Not Available | - | 4132298 - 4132879 | 22273.7 |
| hypothetical protein | FD718_18475 | Not Available | - | 4132939 - 4133385 | 16564.2 |
| eve domain-containing protein | FD718_18480 | Not Available | + | 4133461 - 4133919 | 17579.1 |
| cof-type had-iib family hydrolase | FD718_18485 | Not Available | - | 4133987 - 4134784 | 29435.1 |
| alpha/beta fold hydrolase | FD718_18490 | Not Available | - | 4134936 - 4135928 | 37865.9 |
| homoserine/homoserine lactone efflux protein | FD718_18495 | Not Available | + | 4136089 - 4136706 | 21886.3 |
| dna starvation/stationary phase protection protein | FD718_18500 | Not Available | - | 4136958 - 4137434 | 18312.9 |
| patatin family protein | FD718_18505 | Not Available | - | 4137572 - 4138465 | 33118.5 |
| lysr family transcriptional regulator | FD718_18510 | Not Available | - | 4138561 - 4139409 | 31741.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.