Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| proline/glycine betaine abc transporter permease | FD718_18215 | Not Available | - | 4056559 - 4057452 | 32487.8 |
| abc transporter substrate-binding protein | FD718_18220 | Not Available | - | 4057610 - 4058611 | 36621.5 |
| sugar-phosphatase | FD718_18225 | Not Available | + | 4058966 - 4059778 | 29695.2 |
| hypothetical protein | FD718_18230 | Not Available | - | 4059868 - 4060101 | 9436.12 |
| nird/ygiw/ydei family stress tolerance protein | FD718_18235 | Not Available | - | 4060106 - 4060477 | 13055.4 |
| tetr/acrr family transcriptional regulator | FD718_18240 | Not Available | - | 4060719 - 4061330 | 23333.4 |
| efflux rnd transporter periplasmic adaptor subunit | FD718_18245 | Not Available | + | 4061530 - 4062636 | 40164.4 |
| efflux rnd transporter permease subunit | FD718_18250 | Not Available | + | 4062640 - 4065690 | 111325.0 |
| duf535 domain-containing protein | FD718_18255 | Not Available | - | 4065757 - 4066647 | 35115.0 |
| amidohydrolase | FD718_18260 | Not Available | + | 4067031 - 4068467 | 53095.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.