Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | FD718_18060 | Not Available | + | 4020735 - 4022108 | 50038.6 |
| lysr family transcriptional regulator | FD718_18065 | Not Available | - | 4022135 - 4023073 | 35171.2 |
| sodium:proton antiporter | FD718_18070 | Not Available | + | 4023300 - 4025090 | 65523.1 |
| qace family quaternary ammonium compound efflux smr transporter | FD718_18075 | Not Available | + | 4025282 - 4025611 | 11676.8 |
| hypothetical protein | FD718_18080 | Not Available | + | 4025651 - 4025887 | 9450.42 |
| copper chaperone pcu(a)c | FD718_18085 | Not Available | + | 4025954 - 4026364 | 15454.6 |
| phytanoyl-coa dioxygenase family protein | FD718_18090 | Not Available | - | 4026357 - 4027244 | 34074.0 |
| glycosyltransferase family 4 protein | FD718_18095 | Not Available | - | 4027210 - 4028478 | 49018.3 |
| acyltransferase | FD718_18100 | Not Available | - | 4028497 - 4029180 | 25370.1 |
| glycosyltransferase family 4 protein | FD718_18105 | Not Available | - | 4029210 - 4030256 | 39971.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.