Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| h(+)/cl(-) exchange transporter clca | FD718_17950 | Not Available | + | 3998500 - 3999900 | 50106.6 |
| iron-sulfur cluster insertion protein erpa | FD718_17955 | Not Available | + | 3999962 - 4000303 | 12022.1 |
| peptidase m23 | FD718_17960 | Not Available | - | 4000411 - 4001712 | 48542.1 |
| tyrosine--trna ligase | FD718_17965 | Not Available | + | 4001840 - 4003027 | 44348.7 |
| deda family protein | FD718_17970 | Not Available | + | 4003128 - 4003733 | 22371.3 |
| trimeric intracellular cation channel family protein | FD718_17975 | Not Available | - | 4003806 - 4004420 | 21720.4 |
| vitamin b12 abc transporter substrate-binding protein btuf | FD718_17980 | Not Available | - | 4004537 - 4005370 | 31205.3 |
| cobalamin biosynthesis family protein | FD718_17985 | Not Available | - | 4005371 - 4006330 | 35644.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | FD718_17990 | Not Available | - | 4006330 - 4007028 | 24765.8 |
| glutamate synthase small subunit | FD718_17995 | Not Available | - | 4007155 - 4008573 | 52164.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.