Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna ligase | FD718_17750 | Not Available | + | 3949228 - 3951006 | 66141.4 |
| yebc/pmpr family dna-binding transcriptional regulator | FD718_17755 | Not Available | + | 3951238 - 3951984 | 26392.8 |
| crossover junction endodeoxyribonuclease ruvc | FD718_17760 | Not Available | + | 3952001 - 3952522 | 18297.3 |
| holliday junction branch migration protein ruva | FD718_17765 | Not Available | + | 3952692 - 3953315 | 22622.4 |
| holliday junction branch migration dna helicase ruvb | FD718_17770 | Not Available | + | 3953334 - 3954344 | 37546.3 |
| n-acetylneuraminate lyase | FD718_17775 | Not Available | - | 3954520 - 3955422 | 31955.3 |
| murr/rpir family transcriptional regulator | FD718_17780 | Not Available | + | 3955746 - 3956621 | 31280.4 |
| n-acetylmannosamine-6-phosphate 2-epimerase | FD718_17785 | Not Available | + | 3956907 - 3957614 | 24738.8 |
| rok family protein | FD718_17790 | Not Available | + | 3957611 - 3958489 | 30285.3 |
| yhch/yjgk/yial family protein | FD718_17795 | Not Available | + | 3958552 - 3959019 | 17583.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.