Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yche family naat transporter | FD718_17700 | Not Available | - | 3936995 - 3937633 | 22510.4 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | FD718_17705 | Not Available | + | 3938434 - 3941127 | 97151.9 |
| sdr family oxidoreductase | FD718_17710 | Not Available | - | 3941211 - 3941891 | 24921.9 |
| hypothetical protein | FD718_17715 | Not Available | - | 3942124 - 3942657 | 19745.5 |
| alpha-l-glutamate ligase-like protein | FD718_17720 | Not Available | - | 3942802 - 3943776 | 35622.3 |
| gonadoliberin iii | FD718_17725 | Not Available | - | 3943780 - 3945291 | 55915.5 |
| atp-dependent zinc protease | FD718_17730 | Not Available | - | 3945310 - 3946107 | 29959.9 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | FD718_17735 | Not Available | - | 3946196 - 3947170 | 37746.3 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | FD718_17740 | Not Available | - | 3947189 - 3947917 | 27174.5 |
| duf72 domain-containing protein | FD718_17745 | Not Available | - | 3948089 - 3948985 | 34043.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.