Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | FD718_17600 | Not Available | - | 3917340 - 3917735 | 14941.7 |
| na+/h+ antiporter nhac family protein | FD718_17605 | Not Available | + | 3918397 - 3919992 | 56662.9 |
| thymidine kinase | FD718_17610 | Not Available | + | 3920146 - 3920724 | 21935.1 |
| duf2132 domain-containing protein | FD718_17615 | Not Available | + | 3920749 - 3920961 | 8448.27 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | FD718_17620 | Not Available | - | 3921065 - 3921685 | 22955.5 |
| imidazole glycerol phosphate synthase subunit hisf | FD718_17625 | Not Available | - | 3921682 - 3922455 | 28548.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | FD718_17630 | Not Available | - | 3922465 - 3923202 | 26490.6 |
| imidazole glycerol phosphate synthase subunit hish | FD718_17635 | Not Available | - | 3923217 - 3923843 | 22833.9 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | FD718_17640 | Not Available | - | 3923843 - 3924916 | 39784.5 |
| histidinol-phosphate transaminase | FD718_17645 | Not Available | - | 3924929 - 3925975 | 38647.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.