Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase flavoprotein subunit | FD718_17450 | Not Available | + | 3884628 - 3886394 | 64383.6 |
| succinate dehydrogenase iron-sulfur subunit | FD718_17455 | Not Available | + | 3886409 - 3887119 | 26380.1 |
| 2-oxoglutarate dehydrogenase e1 component | FD718_17460 | Not Available | + | 3887271 - 3890093 | 106257.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | FD718_17465 | Not Available | + | 3890125 - 3891336 | 44376.6 |
| adp-forming succinate--coa ligase subunit beta | FD718_17470 | Not Available | + | 3891474 - 3892640 | 41320.6 |
| succinate--coa ligase subunit alpha | FD718_17475 | Not Available | + | 3892640 - 3893512 | 29814.1 |
| zinc abc transporter permease subunit znub | FD718_17480 | Not Available | - | 3893602 - 3894387 | 27850.6 |
| zinc abc transporter atp-binding protein znuc | FD718_17485 | Not Available | - | 3894399 - 3895148 | 27546.7 |
| zinc abc transporter substrate-binding protein znua | FD718_17490 | Not Available | + | 3895245 - 3896186 | 34993.3 |
| murein dd-endopeptidase mepm | FD718_17495 | Not Available | + | 3896189 - 3897538 | 50079.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.