Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter kef | FD718_17350 | Not Available | - | 3862797 - 3864386 | 57745.6 |
| rok family protein | FD718_17355 | Not Available | - | 3864676 - 3865890 | 44017.3 |
| n-acetylglucosamine-6-phosphate deacetylase | FD718_17360 | Not Available | - | 3865894 - 3867030 | 40897.9 |
| glucosamine-6-phosphate deaminase | FD718_17365 | Not Available | - | 3867048 - 3867848 | 29980.6 |
| pts glucose transporter subunit iibc | FD718_17370 | Not Available | + | 3868105 - 3869574 | 51736.9 |
| beta-n-acetylhexosaminidase | FD718_17375 | Not Available | + | 3869746 - 3872409 | 98018.4 |
| glutamine--trna ligase | FD718_17380 | Not Available | + | 3872643 - 3874310 | 63590.2 |
| ferric iron uptake transcriptional regulator | FD718_17385 | Not Available | - | 3874599 - 3875045 | 16850.0 |
| duf4442 domain-containing protein | FD718_17390 | Not Available | + | 3875238 - 3875699 | 17613.3 |
| flavodoxin flda | FD718_17395 | Not Available | - | 3875815 - 3876342 | 19721.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.