Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase rpia | FD718_17300 | Not Available | + | 3851459 - 3852118 | 23197.0 |
| phosphoglycerate dehydrogenase | FD718_17305 | Not Available | + | 3852409 - 3853638 | 44647.8 |
| oxidative stress defense protein | FD718_17310 | Not Available | - | 3853706 - 3854434 | 26393.3 |
| ybak/ebsc family protein | FD718_17315 | Not Available | + | 3854681 - 3855211 | 19868.9 |
| small-conductance mechanosensitive channel mscs | FD718_17320 | Not Available | - | 3855297 - 3856181 | 31756.6 |
| class ii fructose-bisphosphate aldolase | FD718_17325 | Not Available | - | 3856531 - 3857607 | 38831.9 |
| phosphoglycerate kinase | FD718_17330 | Not Available | - | 3857748 - 3858911 | 40745.0 |
| erythrose-4-phosphate dehydrogenase | FD718_17335 | Not Available | - | 3858986 - 3860026 | 38474.6 |
| transketolase | FD718_17340 | Not Available | - | 3860314 - 3860627 | 11258.3 |
| asparagine synthase b | FD718_17345 | Not Available | - | 3860765 - 3862435 | 62665.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.