Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-e factor regulatory protein rseb | FD718_17195 | Not Available | - | 3836045 - 3837025 | 36607.1 |
| anti-sigma e factor | FD718_17200 | Not Available | - | 3837025 - 3837675 | 23594.6 |
| rna polymerase sigma factor rpoe | FD718_17205 | Not Available | - | 3837699 - 3838277 | 21879.1 |
| l-aspartate oxidase | FD718_17210 | Not Available | + | 3838691 - 3840307 | 60153.3 |
| hypothetical protein | FD718_17215 | Not Available | - | 3840355 - 3840852 | 19764.4 |
| succinate dehydrogenase assembly factor 2 | FD718_17220 | Not Available | - | 3840776 - 3841036 | 9843.84 |
| pp_03391 | FD718_17225 | Not Available | + | 3841305 - 3842276 | Not Available |
| ybak/ebsc family protein | FD718_17230 | Not Available | + | 3842283 - 3842750 | 16851.8 |
| hypothetical protein | FD718_17235 | Not Available | + | 3842928 - 3843299 | 14051.4 |
| lysr family transcriptional regulator | FD718_17240 | Not Available | + | 3843386 - 3844318 | 35552.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.