Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metal ion permease | FD718_17045 | Not Available | + | 3801566 - 3802150 | 21410.1 |
| Trna-ser | Not Available | Not Available | + | 3802153 - 3802244 | Not Available |
| carbon storage regulator csra | FD718_17055 | Not Available | - | 3802461 - 3802658 | 7186.77 |
| aspartate kinase | FD718_17060 | Not Available | - | 3802742 - 3803938 | 42903.8 |
| alanine--trna ligase | FD718_17065 | Not Available | - | 3803996 - 3806617 | 95155.9 |
| voltage-gated potassium channel protein | FD718_17070 | Not Available | - | 3806894 - 3808126 | 45438.4 |
| recombinase reca | FD718_17075 | Not Available | - | 3808315 - 3809370 | 37739.5 |
| nicotinamide-nucleotide amidase | FD718_17080 | Not Available | - | 3809508 - 3809996 | 17224.4 |
| dna mismatch repair protein muts | FD718_17085 | Not Available | + | 3810209 - 3812812 | 96325.4 |
| rna polymerase sigma factor rpos | FD718_17090 | Not Available | - | 3812962 - 3813963 | 37672.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.