Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit gamma | FD718_16995 | Not Available | - | 3790896 - 3791528 | 23910.7 |
| formate dehydrogenase subunit beta | FD718_17000 | Not Available | - | 3791525 - 3792415 | 32691.9 |
| formate dehydrogenase-n subunit alpha | FD718_17005 | Not Available | - | 3792419 - 3795433 | 111591.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | FD718_17010 | Not Available | + | 3795538 - 3796386 | 31255.9 |
| penicillin-insensitive murein endopeptidase | FD718_17015 | Not Available | + | 3796755 - 3797558 | 29711.7 |
| yfhl family 4fe-4s dicluster ferredoxin | FD718_17020 | Not Available | - | 3797653 - 3797907 | 9411.24 |
| u32 family peptidase | FD718_17025 | Not Available | - | 3797913 - 3799289 | 51922.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | FD718_17030 | Not Available | - | 3799461 - 3800105 | 22659.8 |
| dna-3-methyladenine glycosylase i | FD718_17035 | Not Available | + | 3800270 - 3800860 | 22672.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | FD718_17040 | Not Available | - | 3800857 - 3801333 | 17356.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.