Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin flda | FD718_16640 | Not Available | - | 3693433 - 3693921 | 17851.6 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | FD718_16645 | Not Available | - | 3693933 - 3697490 | 130563.0 |
| hydroxylamine reductase | FD718_16650 | Not Available | - | 3697651 - 3698994 | 48686.5 |
| m20 family metallopeptidase | FD718_16655 | Not Available | - | 3699260 - 3700384 | 40143.0 |
| hypothetical protein | FD718_16660 | Not Available | - | 3700468 - 3700929 | 16005.5 |
| yjih family protein | FD718_16665 | Not Available | - | 3700929 - 3701663 | 26017.3 |
| na+/h+ antiporter nhac | FD718_16670 | Not Available | - | 3702210 - 3703658 | 51163.7 |
| aspartate-semialdehyde dehydrogenase | FD718_16675 | Not Available | + | 3704366 - 3705481 | 40420.7 |
| superoxide dismutase | FD718_16680 | Not Available | - | 3705652 - 3706236 | 21484.1 |
| grx4 family monothiol glutaredoxin | FD718_16685 | Not Available | + | 3706743 - 3707072 | 12190.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.